Lemon Poppy Seed Baked Donuts

By Jess

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This Paleo recipe for lemon poppy seed baked donuts keeps me out of the drive-thru lane.


Skip the local donut shop drive-thru and grab a homemade Paleo lemon poppyseed donut instead!

I used to pull up to the local donut shop multiple times a week and grab a donut and a cup of coffee with cream and sugar for breakfast. I always used the mental excuse that I was running late and that one donut wouldn’t kill me and that it was better to have something for breakfast than nothing. I seriously doubt that logic now but there are still days when I’m running late and want to grab something tasty on my way out the door.

For me, eating Paleo is more than just cooking and eating the “right” things; it’s about being prepared. It takes a little more time on the weekends so that during the week I always have a few meals ready to go when I don’t have time to cook, but I happily trade that time for my current and more healthy lifestyle.

donut ingredients

These lemon poppy seed donuts are the perfect example. They are just as easy to make as traditional donuts – actually easier, I think, because the whole “boiling in oil” of traditional donuts freaks me out a bit – and they satisfy my need to have a sweet baked item to grab on my way out the door. And, like many Paleo recipes, it’s as simple as making a few substitutions of key ingredients to make the recipe Paleo friendly.

mixing the donut batter

The biggest and most important substitution in this recipe is the kind of flour we use. Instead of wheat flour, this recipe uses coconut and arrowroot flours. I’m sure you’re all familiar with coconuts, if not their flour, but you may be wondering what arrowroot is and why it’s better than wheat flour.

The arrowroot is a tuber – a root – that is traditionally found in South America and has been used for millennia in cooking by people in that area. It is starchy and is a great thickener for soups and stews but its flour is also a great substitute for wheat flour – it’s gluten free!

The only other Paleo-friendly substitution in this recipe is that I use almond milk instead of cow’s milk to get the batter to the right wetness. So that’s pretty simple! The rest of the ingredients are all about flavor – and boy do these donuts have flavor!

baked donuts

You need surprisingly little lemon juice to get the lemon flavor that makes these lemon poppy seed donuts such a treat. Only one teaspoon! What really boosts the flavor is the lemon zest. The zest is the yellow part of the peel of the lemon.

To get the zest, you can buy a special tool – a zester – that does a great job scraping off just the zest. Or you can use a knife. Just make sure to scrape shallowly at the lemon because you don’t want any of the white part of the peel. The white part is bitter and doesn’t add any lemony flavor, so you want just the bright yellow part, which will add a punch of lemon to your donuts.

The poppy seeds are the tiny black seeds of the poppy flower. Amidst the tangy lemon flavor, the flavor of the seeds is not that distinct, but they have a subtle nutty and floral taste that really blends well with lemon. But be warned: check your teeth after eating anything with poppy seeds. They’re notorious for getting stuck!

lemon poppy seed baked donuts

The honey and the desiccated coconut are the icing on the cake… literally. The honey of course enhances the sweetness and the coconut and lemon go hand in hand and make you feel like you’re enjoying a tropical treat.

So next week, skip the donut shop drive-thru, whip up a batch of these lemon poppy seed donuts and get your Paleo breakfast baked goods to go at home.

(Make this next: Hummingbird Bars)


    • 1/3 cup coconut flour
    • 1 tbsp arrowroot flour
    • 1 tsp baking soda
    • pinch of salt
    • 1 tsp lemon juice
    • 1 tsp lemon zest
    • 1 tbsp poppy seeds
    • 2 large eggs
    • 2 tbsp liquid coconut oil
    • 2 tbsp honey
    • ½ cup almond milk
    • coconut oil for greasing a pan
  • For glaze
    • 2 tbsp warm honey
    • ¼ cup unsweetened desiccated coconut
    • 1 tsp poppy seeds


  1. Preheat oven to 350 F. Lightly grease a standard donut pan with coconut oil. Set aside.
  2. In a stand mixer, combine the coconut flour, arrowroot flour, baking soda and pinch of salt.
  3. Add in the milk, eggs, honey, coconut oil, lemon juice, lemon zest, poppy seeds and mix to combine.
  4. Allow the batter to rest for about 5 minutes to ensure the moisture is absorbed by the coconut flour.
  5. Divide the batter evenly between the 6 donut molds. Bake for 17- 20 minutes, or until toothpick comes out clean and donuts are set.
  6. Remove the pan from the oven and let cool for 20 minutes.
  7. Gently remove the donuts from the pan. Brush the donuts with warm honey and sprinkle with desiccated coconut and poppy seeds.


Serving Size





Total Time

35 minutes

Prep Time

15 minutes

Cook Time

20 minutes

Print Recipe


Ask a Question 

  1. Can I use another kind of flour, instead of arrowroot flour??
    Thank you in advance, for your help.


  2. Can I use tapioca flour insted the arrowroot flour? Thank you….I just bought the gluten free blend of rice flour,potato starch,pea fiber,tapioca starch and can than gum….I was looking for tapioca flour,but they’re out so I bought this kind,you think I can use as paleo?…I lost 10 pounds less the one month….

    • Hi Carmen,
      Yes, you can use tapioca flour instead the arrowroot flour. 🙂 Congrats on your results!

    • Hi Carmen,
      Congrats on your results! Yes, you can use tapioca flour instead the arrowroot flour. 🙂

  3. Hi! Are these good if not eaten right away? I’m thinking about taking these to a picnic but most donut recipes I find specifically suggest eating right after icing them.
    Thank you! (From Portugal)

  4. Can I omit the poppy seeds and substitute vanilla extract for the lemon juice and vanilla beans for the lemon zest? We don’t care much for lemon baked goods. Thank-you.

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